Guide

Subscription platforms compared — Shopify, Stripe Billing, Chargebee, Recharge headless

A platform-level comparison for merchants who haven't committed to Shopify yet, or who might leave it. Five real options — Shopify + native app, Stripe Billing, Chargebee, Recharge headless, fully custom — with the decision criteria, switching costs, and the question that decides each one.

16 min readUpdated 21 May 2026By SimpleSubscription Team
On this page (10)
  1. The five subscription platforms that matter
  2. Shopify + subscription app — the default for physical DTC
  3. Stripe Billing — the SaaS-native choice
  4. Chargebee — the enterprise SaaS billing system
  5. Recharge headless — for the $5M+ DTC brand running custom storefronts
  6. Fully custom — when subscriptions are the product
  7. The decision tree — which platform fits you
  8. The switching cost between platforms
  9. Do you need to go headless?
  10. Where SimpleSubscription fits in this picture

Most subscription guides assume you've already picked Shopify. This one doesn't. If you're starting from scratch, or running on WooCommerce or Magento and weighing a replatform, or already on Shopify but wondering whether you'd be better served headless on a billing-only platform, the question is which subscription platform — not which subscription app. The two questions look similar and are completely different. Picking an app is a feature-list decision inside a single ecosystem. Picking a platform locks you into an entire commerce stack: checkout, customer accounts, payment processing, fulfillment, analytics, taxes, and the universe of apps that integrate with it. The trade-offs cut across cost, control, and the speed at which you can iterate. This guide covers the five real options, the actual decision criteria, the migration cost between them, and the question that decides each one — without pretending we're neutral. We make a Shopify subscription app, so our recommendation will lean Shopify for our target customer, but the comparison below is honest about where other platforms genuinely win.

The five subscription platforms that matter

Strip away the marketing and there are really five paths to running a subscription business at meaningful scale. Each has a coherent identity, a clear winning use case, and a list of things it's bad at. Pick the wrong one early and the cost of switching grows roughly linearly with subscriber count.

  • Shopify + subscription app — Shopify Plus or standard plan plus an App Store app (Recharge, Loop, Skio, SimpleSubscription). Tightest physical-product integration on the market. Pricing: Shopify plan ($29-2000+/mo) + app fee (flat or %). Best for DTC physical-product merchants.
  • Stripe Billing — pure billing infrastructure, no storefront. You build the website, the checkout, the customer portal yourself; Stripe handles subscription billing, dunning, tax, invoicing. Pricing: 0.5-0.8% of recurring revenue + Stripe payment fees. Best for SaaS, digital products, and businesses with engineering resources.
  • Chargebee — full subscription billing platform with deep enterprise features (revenue recognition, multi-currency, complex pricing models, RevOps integrations). Pricing: from $599/mo on standard tier, custom for enterprise. Best for B2B SaaS and complex pricing models (per-seat, usage-based, hybrid).
  • Recharge headless — Recharge's API-only product, decoupled from any specific storefront. Customer pairs it with BigCommerce, Salesforce Commerce Cloud, custom front-ends. Pricing: $399/mo + 1% transaction fee minimum, enterprise tiers higher. Best for $5M+ ARR brands running custom storefronts.
  • Fully custom (Postgres + Stripe APIs) — build everything yourself. Total control, total cost. Pricing: developer salaries. Best for: companies where subscriptions ARE the product and engineering capacity isn't the constraint.
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Subscription platforms range from turnkey (Shopify + app) to fully built-from-scratch (custom on Stripe APIs). Each step up costs more engineering and gives more control.
Five viable paths, each with a winning use case. The question isn't which is best — it's which fits your product type, scale, and engineering capacity.

Shopify + subscription app — the default for physical DTC

Of the five platforms, Shopify + a subscription app is the choice that needs the least justification for the segment it serves: DTC brands selling physical consumer goods, sub-$50M ARR, with limited or no engineering team. Shopify gives you a storefront that converts well out of the box, a checkout that handles tax in 60+ countries, fulfillment integrations with virtually every 3PL, and an app ecosystem covering subscriptions, email, analytics, reviews, and everything else. The subscription app fills in the recurring-billing layer.

The downside is the same as the upside: you're inside the Shopify ecosystem. Customer data is structured Shopify's way, the checkout is Shopify's checkout (limited customisation below Shopify Plus), and you pay the Shopify percentage of revenue plus your subscription app's fee. For most stores that's an excellent trade. For some — high-volume, low-margin, custom-tech-heavy — it isn't.

  • Wins on — speed to launch (days, not months), physical fulfillment integration, ecosystem breadth, lower engineering load
  • Loses on — checkout customisation (without Plus), per-seat or usage-based billing, deep enterprise revenue-recognition
  • Pricing — Shopify standard $79/mo, Shopify Plus from $2000/mo. Subscription apps from $0 (free tier) to $999/mo + transaction fees
  • Best for — DTC physical goods, consumables, boxes, $50k-$50M ARR, small/no engineering team
Tip
Picking among Shopify apps is a separate question

Once you've decided Shopify, the subscription-app choice is its own decision tree. See our best Shopify subscription app ranking and the feature comparison for that level.

Shopify + subscription app is the default for physical-product DTC. Fast, integrated, ecosystem-rich — at the cost of platform lock-in.

Stripe Billing — the SaaS-native choice

Stripe Billing is what most SaaS companies use, and what most physical-product companies don't realise is available to them. It's billing infrastructure — Stripe handles the recurring charge, the dunning, the tax calculation, the invoicing — and nothing else. You bring your own storefront, your own checkout, your own customer portal. That sounds like a lot to bring, and it is, but for businesses with engineering teams already building a custom web app, Stripe Billing is the path of least resistance.

Stripe's billing primitives are richer than Shopify's. You get proration, mid-cycle plan changes, usage-based billing, tiered pricing, free trials with arbitrary lengths, coupons that stack in complex ways, and multi-currency without extra config. None of this matters for a coffee subscription. All of it matters if you're building a SaaS where customers can add seats, change tier mid-month, or be billed per API call.

  • Wins on — billing flexibility (proration, usage, tiered, hybrid), developer experience, multi-currency, integration into existing app
  • Loses on — physical storefront (you build it), fulfillment integration (you build it), app ecosystem (build it or use API marketplace)
  • Pricing — 0.5% to 0.8% of recurring revenue + standard Stripe processing fees. Cheap at small scale, gets expensive at $10M+ ARR (worth negotiating)
  • Best for — SaaS, digital products, hybrid SaaS+physical, businesses with engineering team
Watch out
Stripe Billing is not a storefront

Many founders confuse Stripe with a commerce platform. It is not. Stripe Checkout gives you a hosted page; Stripe Payment Links give you a single-product URL; but a real ecommerce experience (browse, filter, multi-product cart, account history) you build yourself or pair Stripe with a separate storefront (BigCommerce, Webflow + Stripe, Next.js + Stripe). Going in blind here adds 3-6 months of unplanned engineering work.

Stripe Billing = billing primitives only, you bring the storefront. Wins for SaaS and digital. Bring an engineering team.

Chargebee — the enterprise SaaS billing system

Chargebee sits where Stripe Billing stops scaling for complex B2B businesses. It's a full subscription management platform with deep features for revenue recognition (ASC 606 / IFRS 15), multi-entity billing, complex pricing models that combine subscription + usage + one-time + add-ons, and integrations with the RevOps stack (Salesforce, NetSuite, HubSpot, Avalara). At $599-2500/mo plus enterprise custom pricing, it's not the cheap choice — but for the businesses it's designed for, no other platform comes close.

Chargebee's real differentiator is the combination of billing flexibility plus financial-operations depth. SaaS companies at $5M+ ARR start needing actual revenue-recognition reporting, multi-currency consolidation, customer-balance handling, dunning that integrates with Salesforce cases. Stripe Billing makes you build a lot of that. Chargebee gives it to you out of the box at the cost of a steeper learning curve and a higher monthly fee.

  • Wins on — enterprise billing complexity, revenue recognition, RevOps integration, multi-entity / multi-currency at scale
  • Loses on — small-team simplicity (it's overkill for a coffee subscription), physical-product integration (not its focus)
  • Pricing — from $599/mo standard, enterprise tiers commonly $2k-10k+/mo. ROI clear at $5M+ ARR; questionable below
  • Best for — B2B SaaS, $5M+ ARR, complex pricing, finance team that needs proper rev rec
Chargebee = Stripe Billing's enterprise cousin. Wins when billing complexity exceeds what Stripe handles out of the box.

Recharge headless — for the $5M+ DTC brand running custom storefronts

Recharge built its name as a Shopify subscription app and is still best known there, but it also offers a headless / API-only product for brands that want Recharge's subscription engine without committing to Shopify's storefront. Customers typically pair it with BigCommerce, Salesforce Commerce Cloud, or a custom Next.js/Remix front-end. The value proposition: Recharge's mature subscription features (cancel flows, retention, dunning, build-a-box) without being locked into a specific commerce platform.

This is the most expensive path on the list per dollar of recurring revenue, and it's deliberately so. At $399/mo + 1% transaction fee minimum (with enterprise tiers running $2-10k+/mo plus higher percentages), Recharge headless targets large DTC brands where the subscription engine's quality matters more than the cost. If you're a $20M ARR brand running on Salesforce Commerce Cloud with a custom front-end, Recharge headless is probably the cleanest path. If you're a $500k ARR brand, it's massive overkill.

  • Wins on — subscription feature depth, mature retention tooling, works with any storefront via API
  • Loses on — cost (high % at scale), complexity (it's a full integration project), small-team accessibility
  • Pricing — from $399/mo + 1% transaction fee on standard, enterprise custom
  • Best for — $5M+ ARR DTC brands, headless storefronts, brands switching off Shopify for custom UX
Tip
Recharge on Shopify is a different product

Don't confuse Recharge's standard Shopify app (an App Store install on top of Shopify) with Recharge headless (an API-only product paired with non-Shopify storefronts). They share the same brand and broadly the same features but very different pricing and integration models.

Recharge headless = the subscription engine for big DTC brands not on Shopify. Pricey but mature.

Fully custom — when subscriptions are the product

Building a subscription system from scratch — Postgres + Stripe (or Adyen) APIs + your own customer portal — is a real option, and the right one for a specific kind of company: one where the subscription experience IS the product, and where engineering capacity isn't the constraint. Substack-style content subscriptions, Patreon-clone creator subscriptions, complex tiered B2B subscriptions, and anything where you need pixel-level control over the subscriber experience tend to end up here.

The cost is real and ongoing. A custom subscription system needs: a billing engine that handles renewals, dunning, prorations, refunds; a customer portal with auth and self-service; webhook handling for payment provider events; analytics that report MRR, churn, LTV correctly; tax calculation (you'll integrate Avalara or Stripe Tax); and compliance handling for the regulatory layer. Building this takes 6-12 months of engineering for v1 and is never really done. The cost is justified only when the business itself depends on subscription mechanics being different from what off-the-shelf platforms provide.

  • Wins on — total control, no platform fees, custom flows impossible elsewhere
  • Loses on — engineering cost (always), maintenance burden, all the edge cases off-the-shelf platforms have already solved
  • Pricing — your engineering salaries. Typically $200k-2M to build v1, then ongoing maintenance
  • Best for — companies where subscriptions = the product (Substack, Patreon, niche B2B SaaS), and engineering capacity isn't the bottleneck
Custom = right answer when subscriptions are the product, wrong answer almost everywhere else. Off-the-shelf platforms have already solved every problem you'll discover.

The decision tree — which platform fits you

Most of the decision happens on three questions. Answer them honestly and the right platform usually picks itself.

  1. Are you selling physical goods or digital/access? Physical then Shopify + app or Recharge headless. Digital then Stripe Billing or Chargebee.
  2. Do you have an engineering team that can own this? No then Shopify + app (turnkey). Yes then Stripe Billing or custom unlocks more.
  3. What's your projected ARR in 18 months? Under $1M then optimise for speed and cost (Shopify + app, Stripe Billing). $1-10M then optimise for feature depth (Chargebee or premium Shopify apps). $10M+ then also evaluate Recharge headless or custom for control.
Checklist
Quick decision matrix
  • Physical goods, small team, sub-$5M ARR — Shopify + subscription app
  • Digital / SaaS, in-house dev team, sub-$5M ARR — Stripe Billing
  • B2B SaaS, complex pricing, $5M+ ARR — Chargebee
  • DTC physical, $5M+ ARR, custom storefront — Recharge headless (or Shopify Plus + premium app)
  • Subscription IS the product, $10M+ ARR ambitions, strong engineering — fully custom
  • On Shopify already, growing — stay on Shopify, just pick the right app
  • On WooCommerce / Magento / BigCommerce — consider replatform to Shopify OR pair with Stripe Billing depending on physical/digital
Three questions decide the platform: physical vs digital, engineering team or not, target ARR. Most overthinking on this question is unnecessary.

The switching cost between platforms

Switching platforms is harder than picking the right one initially. The cost scales with subscriber count, contract complexity, and the depth of integration with the rest of your stack (warehouse, 3PL, ESP, analytics). It's not impossible — brands replatform off Shopify every month — but the lift is usually 3-6 months calendar time and 2-5% of ARR in revenue disruption.

  • Subscriber data migration — every subscriber's payment method, address, cadence, next renewal date, and history needs to move. Card vaults are not portable between processors, so customers may need to re-authorise (which costs 5-15% of subscribers).
  • Storefront rebuild — different platforms = different theming, components, checkout. Budget 2-4 months of design + engineering even with a designer.
  • App / integration migration — every app you use (email, analytics, reviews, loyalty, shipping) needs an equivalent on the new platform, plus reconfiguration.
  • SEO disruption — URL structure changes, 301 redirect maps need to be built and tested.
  • Tax / compliance reconfiguration — VAT, sales tax, auto-renewal disclosure all need re-setup on the new platform.
Watch out
Replatform fatigue is real

The most common mistake is replatforming because of a single feature gap, then discovering the new platform has its own gaps. If you're considering a replatform, write down all 10 reasons in priority order. If only the top 1-2 reasons hold up under scrutiny, the right answer is often to fix the gap on your current platform (a new app, a custom integration) instead of replatforming.

Within the Shopify ecosystem, switching subscription apps is far cheaper — typically 1-2 weeks with most modern apps offering free migration. Switching ecosystems entirely is the expensive move. If you're on Shopify and frustrated with your current subscription app, see our subscription migration guide for the much-easier app-to-app switch.

Switching app = days. Switching platform = months. Be sure the gap you're solving is real before replatforming.

Do you need to go headless?

Headless commerce — separating the storefront from the commerce backend — is the most-asked-about architecture decision of the last three years. The honest answer for most subscription businesses: probably not. Headless adds engineering complexity in exchange for storefront flexibility. For a brand whose competitive advantage comes from the customer experience, that flexibility is worth it. For a brand whose competitive advantage comes from the product, the supply chain, or the brand, headless is overhead that returns less than its cost.

If you're considering headless, the platform question changes. Headless storefronts pair naturally with Stripe Billing (DIY everything), Recharge headless (subscription engine over custom storefront), or Shopify Hydrogen (Shopify's official headless framework, which keeps you in the Shopify ecosystem). Each is a different commitment.

  • Pick headless if — your storefront UX is your differentiator, you have engineering capacity, customer experience flexibility translates to measurable conversion or retention
  • Skip headless if — you're under $5M ARR, your team is mostly marketing/ops, you can't articulate the specific UX advantage you'd unlock
  • Headless on Shopify — Hydrogen + Shopify backend keeps subscription apps working; modern subscription apps support headless integration
  • Headless off Shopify — Recharge headless or Stripe Billing + custom storefront, much more engineering
Headless is the right answer when storefront UX is your edge. For most subscription brands, it isn't.

Where SimpleSubscription fits in this picture

We sell a Shopify subscription app. That places us squarely in the first column of the comparison — Shopify + subscription app. If your business is Shopify-shaped (physical goods, DTC, small-to-mid engineering team, sub-$50M ARR), then the choice for you is which Shopify subscription app, not which platform. That's a different question we cover in detail in the app ranking.

If your business isn't Shopify-shaped — you're building SaaS, you're a $20M+ brand needing headless, you're a Substack-style content business — we'll honestly tell you to look at Stripe Billing, Chargebee, or Recharge headless instead. Picking the wrong platform is more expensive than picking any wrong app within a platform, so it's worth the time to get this layer right first.

Tip
Already on Shopify? Start app-level

If you're already running a Shopify store, the platform question is mostly answered. Your next decision is which subscription app — and that's a 30-minute decision, not a 3-month one. App ranking →

Right platform first, right app second. We optimise for the Shopify path; if you're not Shopify-shaped, we'll point you elsewhere.

Frequently asked questions

What's the difference between a subscription platform and a subscription app?

A platform is the underlying commerce stack (Shopify, BigCommerce, Stripe Billing, Chargebee). A subscription app is software that adds recurring-billing capabilities on top of a platform (Recharge, Loop, SimpleSubscription, etc., all running on Shopify). One platform decision; one app decision within that platform.

Can I use Stripe Billing on a Shopify storefront?

Not directly. Shopify checkout uses Shopify's own payment routing, and subscriptions inside Shopify's ecosystem run on Shopify's Subscription Contracts API. You can use Stripe as the payment processor inside Shopify (via Shopify Payments alternatives), but the subscription billing logic is Shopify-app-driven, not Stripe-Billing-driven. To use Stripe Billing's specific features (proration, usage-based), you'd need a non-Shopify storefront.

Which platform handles tax best for subscriptions?

All five handle it reasonably well at this point. Shopify Tax is excellent for US states and EU VAT and is one click to enable. Stripe Tax is similarly capable and integrates with Stripe Billing natively. Chargebee integrates with Avalara for the deepest enterprise tax workflows. None of them get tax wrong out of the box — the differences show up at edge cases (digital goods cross-border, B2B exemptions, hyper-local rates).

Is migrating from Shopify to a custom platform worth it for control?

Almost never below $10M ARR. The engineering cost (6-12 months for v1, 2-3 engineers ongoing) plus the maintenance burden plus the lost ecosystem (no more App Store apps, no more native fulfillment integrations) is rarely justified by the control you gain. Stay on Shopify or replatform to another turnkey platform unless your subscription mechanics are genuinely unique.

Can I run both Shopify + Stripe Billing in parallel?

Some businesses do: Shopify for physical product, Stripe Billing for a separate SaaS or membership tier. Two systems, two customer accounts, two analytics views — it works but doubles the operational overhead. Usually justified only if the two product lines are genuinely separate businesses.

What's the cheapest platform at $10k MRR?

Shopify + a flat-fee subscription app (like SimpleSubscription Growth at $39/mo) is among the cheapest, totalling around $200-300/mo all-in at $10k MRR. Stripe Billing is similarly cheap (around $50-100/mo at 0.5% of $10k). Recharge on Shopify at percentage-based fees would be $200+/mo just for the app fee. Chargebee and Recharge headless are overkill at this scale.

What's the cheapest platform at $1M ARR?

It depends on physical-vs-digital. For physical DTC, Shopify + a flat-fee app stays cheapest (around $99-299/mo for the app, no transaction fees). Percentage-based apps like Recharge or Loop would charge $800-1,200/mo at this scale just for the subscription app fee. For digital, Stripe Billing at 0.5% = $5k/yr — competitive with apps.

Does platform choice affect dunning recovery rates?

Slightly. All five platforms support structured dunning, but their default sequences and integrations with card-update flows vary. Shopify-based apps with native Shop Pay integration tend to have the highest auto-recovery rates because Shop Pay can refresh card credentials automatically. Stripe Billing has good recovery via Stripe's automatic card-updater service. Differences are 2-5 percentage points typically — material but not platform-deciding.

Can I switch from Recharge headless back to Shopify-native?

Yes. Recharge offers migration tools both directions. The Shopify-native path is dramatically simpler operationally and cheaper at most scales. The reason brands go headless in the first place is usually storefront flexibility — if that need fades or wasn't real, switching back is often a clear win.

What if I'm on Wix, Squarespace, or another non-Shopify platform?

Wix and Squarespace have native subscription features but they're limited (basic cadence, weak portal, no advanced retention). For serious subscription businesses, the typical path is migrate to Shopify + a subscription app. The migration is 2-6 weeks with proper planning and pays for itself within months in feature depth.

Do subscription platforms handle GDPR / data residency?

Yes, all five do, but the depth varies. Shopify, Stripe, and Chargebee all offer EU data residency for enterprise tiers. Recharge handles GDPR data-export and data-erasure requests via API. Custom builds put the GDPR burden on you. Don't pick the platform on GDPR alone — pick on fit, then verify GDPR compliance is supported.

How long does a typical platform decision take?

If you have clarity on physical-vs-digital, scale, and engineering capacity: 1-2 days of research, a few calls with each shortlisted vendor, and a decision in under a week. If you don't have clarity on those three axes, the platform decision will take months because you're really making a business decision, not a platform decision. Get the business shape clear first.

The pillar

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Shopify + SimpleSubscription = the leanest path for physical DTC

If you're picking the Shopify path, we're the flat-fee, no-transaction-fee subscription app most merchants end up wishing they'd installed from day one.

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